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**This is the mirror of the original
site maintain by LIT.
Workshop on Bioinformatics and Protein
Interaction
Jointly organized
by Institute for Mathematical Sciences (IMS) and Laboratories
for Information Technology (LIT)
Program Information ·
Workshop Schedule · Speakers · Abstracts
THE WORKSHOP TIMETABLE
Session 1: 10 June, Protein Analysis, session chair
Shoba Ranganathan
|
Time
|
Details |
| 1:30 pm |
Lim
SoonWong, Opening address |
| 1:45-2:30 pm |
R.
Manjunatha Kini, Analysis of Protein Sequences and
Identification of Protein-Protein Interaction Sites |
| 2:30-3:15 pm |
Terry
Lybrand, Molecular modeling of protein structure and
function |
| 3:15-3:30 |
Coffee
break |
| 3:30-4:00 pm |
Paul
Tan Thiam Joo, Bioinformatics approach to the
structure-function study of scorpion venoms |
| 4:00-4:45 pm |
Bryan
Grieg Fry, The three finger toxin toolkit |
| 4:45-5:30
pm |
Round
table discussions |
Session 2: 11 June, Protein Interactions, Bryan Grieg
Fry
|
Time
|
Details
|
| 13:00-13:45 |
Terry Lybrand, Molecular
modeling of protein-ligand interactions: Detailed
simulations of a biotin-streptavidin complex |
| 13:45-14:30 |
K.N.
Srinivasan, Identification
of Functional Residues in Scorpion Toxins: A
Bioinformatics Approach |
| 14:30-14:45 |
Coffee break |
| 14:45-15:30 |
Shoba Ranganathan,
Locating the polyanion-binding residues in the 'sushi'
domain 7 of human complement factor H |
| 15:30-16:00 |
Prasanna Kolatkar,
Protein-protein interactions database |
| 16:00-16:45 |
Eastwood Leung,
Strategies for large scale protein-protein interaction
studies. |
Session 3: 12 June, Protein Data Mining, session chair
K.N. Srinivasan
|
Time
|
Details
|
| 13:00-13:45 |
Peter Kuhn, Structural
genomics of Thermotoga maritima - data mining and
target prioritization using protein-protein interaction |
| 13:45-14:30 |
Judice Koh, BioWare - a
data warehousing system for molecular biology. |
| 14:30-14:45 |
Coffee break |
| 14:45-15:30 |
Jeremiah Joseph,
Conserved codon composition of ribosomal protein-coding
genes in Escherichia
coli, M.
tuberculosis and Saccharomyces
cerevisiae:
Lessons from supervised machine learning in functional
genomics |
| 15:30-16:15 |
Vladimir Brusic,
Prediction of peptide binding to families of related
receptors |
| 16:15-17:00 |
Round table discussions |
Keynote and plenary speakers
include
| Speaker |
Title
of Presentation |
| Limsoon
Wong |
Opening
address |
| Terry
P. Lybrand (keynote) |
Molecular
modeling of protein-ligand interactions: Detailed
simulations of a biotin-streptavidin complex |
| Terry
P. Lybrand |
Molecular
modeling of protein structure and function |
| Peter
Kuhn (keynote) |
Structural
genomics of Thermotoga maritima - data mining and
target prioritization using protein-protein interaction |
| R.
Manjunatha Kini |
Analysis
of protein sequences and identification of
protein-protein interaction sites |
| Prasanna
Kolatkar |
Protein-protein
interactions database |
| Shoba
Ranganathan |
Locating
the polyanion-binding residues in the 'sushi' domain 7
of human complement factor H |
| Eastwood
Leung Hon Chiu |
Strategies
for large scale protein-protein interaction studies. |
| Judice
Koh |
BioWare
- a data warehousing system for molecular biology. |
| Vladimir
Brusic |
Prediction
of peptide binding to families of related receptors |
| Bryan
Grieg Fry |
The
three finger toxin toolkit |
| Paul
Tan Thiam Joo |
Bioinformatics
approach to the structure-function study of scorpion
venoms |
| K.N.
Srinivasan |
k-Hefutoxin1,
a novel toxin from the scorpion Heterometrus fulvipes
with unique structure and function: Importance of the
functional diad in potassium channel selectivity |
| Jeremiah
Stanson Joseph |
Conserved
Codon Composition of ribosomal protein- coding genes in Escherichia
coli, M.
tuberculosis and Saccharomyces
cerevisiae:
Lessons from supervised machine learning in functional
genomics |
Program Information ·
Workshop Schedule · Speakers · Abstracts
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